dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01459
Location and strand information: 23080 - 23430 (+)
Family: 1.E.14.1.13
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01460
Location and strand information: 23411 - 24106 (+)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01461
Location and strand information: 24670 - 25641 (+)
Family: null
Protein type: null
Protein description: Mannose-6-phosphate isomerase ManA

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01462
Location and strand information: 25738 - 27048 (+)
Family: CE7
Protein type: CAZyme
Protein description: Acetyl esterase Axe7A
Protein isoelectric point: 7.1919
Protein molecular weight: 49733.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01463
Location and strand information: 27214 - 28680 (-)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01464
Location and strand information: 28742 - 29662 (-)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01465
Location and strand information: 29698 - 31086 (-)
Family: 4.A.5.1.2
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01466
Location and strand information: 31070 - 31291 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01467
Location and strand information: 31364 - 33466 (+)
Family: GH105|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.139
Protein molecular weight: 80123.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01468
Location and strand information: 33554 - 35278 (-)
Family: CE4|CE12|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.771
Protein molecular weight: 64752.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01469
Location and strand information: 35298 - 37484 (-)
Family: CE19|PL10_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7787
Protein molecular weight: 83538.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01470
Location and strand information: 37502 - 38959 (-)
Family: PL1|CE8|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9862
Protein molecular weight: 53382.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01471
Location and strand information: 38973 - 40550 (-)
Family: PL1|CE8|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3724
Protein molecular weight: 57204.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01472
Location and strand information: 40866 - 42143 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01473
Location and strand information: 42319 - 42744 (+)
Family: 1.A.22.1.1
Protein type: TC
Protein description: Large-conductance mechanosensitive channel

Gene clsuter ID: MGYG000001789_19|CGC2
Gene ID: MGYG000001789_01474
Location and strand information: 42928 - 44334 (+)
Family: GH105|GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1395
Protein molecular weight: 52653.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001789_01462	CE7_e24
MGYG000001789_01467	CE8_e34
MGYG000001789_01468	CE8_e6\|CE4_e36\|CE12_e9
MGYG000001789_01469
MGYG000001789_01470	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000001789_01471	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000001789_01474	GH28_e38\|GH105_e32\|3.2.1.67	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001789_01459	hypothetical protein	TC	23080	23430	+	1.E.14.1.13
MGYG000001789_01460	Inner membrane protein YohK	TC	23411	24106	+	2.A.122.1.1
MGYG000001789_01461	Mannose-6-phosphate isomerase ManA	null	24670	25641	+	PMI_typeI_cat
MGYG000001789_01462	Acetyl esterase Axe7A	CAZyme	25738	27048	+	CE7
MGYG000001789_01463	Hexuronate transporter	TC	27214	28680	-	2.A.1.14.25
MGYG000001789_01464	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	28742	29662	-	KduI
MGYG000001789_01465	PTS system galactitol-specific EIIC component	TC	29698	31086	-	4.A.5.1.2
MGYG000001789_01466	hypothetical protein	null	31070	31291	-	No domain
MGYG000001789_01467	hypothetical protein	CAZyme	31364	33466	+	GH105\| CE8
MGYG000001789_01468	hypothetical protein	CAZyme	33554	35278	-	CE4\| CE12\| CE8
MGYG000001789_01469	hypothetical protein	CAZyme	35298	37484	-	CE19\| PL10_1
MGYG000001789_01470	hypothetical protein	CAZyme	37502	38959	-	PL1\| CE8\| PL1_2
MGYG000001789_01471	hypothetical protein	CAZyme	38973	40550	-	PL1\| CE8\| PL1_2
MGYG000001789_01472	hypothetical protein	null	40866	42143	-	TonB_C
MGYG000001789_01473	Large-conductance mechanosensitive channel	TC	42319	42744	+	1.A.22.1.1
MGYG000001789_01474	hypothetical protein	CAZyme	42928	44334	+	GH105\| GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature